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MetaBAT 2
基于 tetranucleotide 频率和覆盖度信息的宏基因组 binning 工具，用于从混合组装结果中恢复微生物基因组。 该方法在精度和召回率之间取得良好平衡，是构建 MAGs 流程中最常用的自动分箱工具之一。
| Property | Value |
|---|---|
| Purpose | 从宏基因组组装结果中进行自动分箱和基因组恢复 |
| Time Complexity | O(n * c) |
| Space Complexity | O(n) |
| Year | 2019 |
| Category | Metagenomics |
Complexity Analysis
- Time Complexity:
O(n * c) - Space Complexity:
O(n)
Performance Insight: The time complexity of this algorithm is polynomial. Linear space can often be reduced by constant factors via sliding-window techniques.
Note: Complexity analysis is based on theoretical models. Actual runtime is affected by input scale, hardware, and implementation optimizations. Benchmark for your specific workload.
Literature & Implementation
Related Tools
MaxBin 2 · CONCOCT · CheckM