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SAIGE

针对不平衡表型的大规模关联分析工具,使用混合模型和 saddleback 近似方法 校正群体结构。该方法特别适合罕见变异和稀有表型的关联分析。

PropertyValue
Purpose处理不平衡表型的大规模关联分析
Time ComplexityO(n * m)
Space ComplexityO(n * m)
Year2018
DifficultyIntermediate
LanguagesR, C++
CategoryPopulation Genetics

Complexity Analysis

  • Time Complexity: O(n * m)
  • Space Complexity: O(n * m)

Performance Insight: The time complexity of this algorithm is polynomial.

Note: Complexity analysis is based on theoretical models. Actual runtime is affected by input scale, hardware, and implementation optimizations. Benchmark for your specific workload.

Literature & Implementation

BOLT-LMM · REGENIE · PLINK

Tags

gwas mixed-model rare-variant unbalanced

Released under the MIT License.