Genozip
专为基因组数据设计的高性能压缩工具,支持 FASTQ、BAM、VCF 等多种格式的无损压缩。 该方法利用基因组数据的特殊结构实现远超通用压缩的压缩比,支持随机访问和加密。
| Property | Value |
|---|---|
| Purpose | 基因组数据的高压缩比无损压缩 |
| Time Complexity | O(n) |
| Space Complexity | O(1) |
| Year | 2021 |
| Category | Data Compression |
Complexity Analysis
- Time Complexity:
O(n) - Space Complexity:
O(1)
Performance Insight: The time complexity of this algorithm is linear (O(n)), scales linearly to TB-scale data and is suitable for streaming pipelines. Space overhead is minimal, making it suitable for memory-constrained or streaming environments.
Note: Complexity analysis is based on theoretical models. Actual runtime is affected by input scale, hardware, and implementation optimizations. Benchmark for your specific workload.
Literature & Implementation
Related Tools
gzip · CRAM · Spring