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Genozip

专为基因组数据设计的高性能压缩工具,支持 FASTQ、BAM、VCF 等多种格式的无损压缩。 该方法利用基因组数据的特殊结构实现远超通用压缩的压缩比,支持随机访问和加密。

PropertyValue
Purpose基因组数据的高压缩比无损压缩
Time ComplexityO(n)
Space ComplexityO(1)
Year2021
CategoryData Compression

Complexity Analysis

  • Time Complexity: O(n)
  • Space Complexity: O(1)

Performance Insight: The time complexity of this algorithm is linear (O(n)), scales linearly to TB-scale data and is suitable for streaming pipelines. Space overhead is minimal, making it suitable for memory-constrained or streaming environments.

Note: Complexity analysis is based on theoretical models. Actual runtime is affected by input scale, hardware, and implementation optimizations. Benchmark for your specific workload.

Literature & Implementation

gzip · CRAM · Spring

Tags

multi-format high-ratio random-access encryption

Released under the MIT License.