标签索引
fast
30 个算法
- ADMIXTURE (2009)
- BLAST (1990)
- Bowtie2 (2012)
- ColabFold (2022)
- DIAMOND (2015)
- DSRC (2013)
- ESMFold (2023)
- ESMFold (2023)
- Edlib (2017)
- FastTree (2010)
- Flye (2019)
- Foldseek (2023)
- Kalign (2005)
- Kallisto (2016)
- Kraken2 (2019)
- MMseqs2 (2017)
- Manta (2016)
- Minimap2 (2018)
- OmegaFold (2022)
- PhyML (2003)
- Prodigal (2010)
- Prodigal (2010)
- SPARK-X (2021)
- STAR (2013)
- Salmon (2017)
- Shasta (2020)
- Strelka2 (2018)
- Wtdbg2 (2019)
- eggNOG-mapper (2017)
- kallisto | bustools (2021)
classic
18 个算法
- BLAST (1990)
- BLAST-based Annotation (1990)
- GLIMMER (1998)
- GeneMark (1993)
- Glimmer (1998)
- LASTZ (2004)
- MODELLER (1993)
- MUSCLE (2004)
- MrBayes (2012)
- Needleman-Wunsch (1970)
- Neighbor-Joining (1987)
- Overlap-Layout-Consensus (OLC) (2010)
- PhyML (2003)
- Rosetta (2003)
- STRUCTURE (2000)
- Smith-Waterman (1981)
- TM-align (2005)
- Tajima's D (1989)
deep-learning
13 个算法
- AlphaFold (2021)
- AlphaFold3 (2024)
- Cellpose (2020)
- DeepSEA (2015)
- DeepSomatic (2024)
- DeepVariant (2018)
- ESMFold (2023)
- RoseTTAFold (2021)
- SignalP (2019)
- StarDist (2018)
- scANVI (2021)
- scVI (2018)
- scVI-tools (2023)
long-read
12 个算法
- Canu (2017)
- Clair3 (2022)
- DeepSomatic (2024)
- Flye (2019)
- GraphAligner (2019)
- Hifiasm (2021)
- Minimap2 (2018)
- Overlap-Layout-Consensus (OLC) (2010)
- Shasta (2020)
- Sniffles2 (2023)
- Wtdbg2 (2019)
- cuteSV (2020)
rna-seq
11 个算法
- BRAKER (2016)
- DESeq2 (2014)
- HISAT2 (2015)
- Kallisto (2016)
- NOISeq (2015)
- RSEM (2011)
- STAR (2013)
- Salmon (2017)
- Sleuth (2017)
- StringTie (2015)
- edgeR (2010)
scalable
11 个算法
- BOLT-LMM (2015)
- Clustal Omega (2011)
- FastTree (2010)
- IQ-TREE (2015)
- MAFFT (2002)
- MMseqs2 (2017)
- RAxML-NG (2019)
- REGENIE (2021)
- SPARK-X (2021)
- SPRING Compress (2020)
- Scanpy (2018)
bayesian
9 个算法
- BEAST2 (2014)
- BayeScan (2008)
- Bayesian Phylogenetic Inference (2001)
- Bracken (2017)
- FreeBayes (2012)
- MrBayes (2012)
- Octopus (2021)
- RevBayes (2016)
- STRUCTURE (2000)
annotation
8 个算法
- BLAST-based Annotation (1990)
- Bakta (2021)
- CellTypist (2022)
- ChromHMM (2012)
- KofamKOALA (2020)
- OrthoFinder (2019)
- Prokka (2014)
- scANVI (2021)
hmm
8 个算法
- AUGUSTUS (2005)
- ChromHMM (2012)
- GeneMark (1993)
- GeneMark-ES (2005)
- HMMER (2011)
- HMMRATAC (2019)
- RNAmmer (2007)
- TMHMM (2001)
language-model
8 个算法
- Ankh (2023)
- ESM-1v (2021)
- ESM-2 (2022)
- ESMFold (2023)
- ESMFold (2023)
- OmegaFold (2022)
- ProtBERT (2020)
- ProtTrans (2021)
structure-prediction
8 个算法
- AlphaFold (2021)
- AlphaFold3 (2024)
- Boltz-1 (2024)
- Chai-1 (2024)
- ESMFold (2023)
- OmegaFold (2022)
- OpenFold (2022)
- RoseTTAFold (2021)
pangenome
7 个算法
- Cactus (2011)
- HiFiBD (2022)
- Minigraph (2020)
- PanVC (2023)
- VG (Variation Graph) (2017)
- odgi (2020)
- seqwish (2020)
prokaryotic
7 个算法
- Bakta (2021)
- GLIMMER (1998)
- GeneMark-ES (2005)
- Glimmer (1998)
- Prodigal (2010)
- Prodigal (2010)
- Prokka (2014)
spatial
7 个算法
- Giotto Suite (2021)
- SPARK (2019)
- SPARK-X (2021)
- Seurat Spatial (2021)
- SpatialDE (2018)
- Squidpy (2021)
- stLearn (2021)
structural-variant
7 个算法
differential-expression
6 个算法
fastq
6 个算法
- DSRC (2013)
- GZIP for FASTQ (1992)
- Orione (2015)
- SPRING (2019)
- SPRING Compress (2020)
- fqzcomp (2014)
maximum-likelihood
6 个算法
- ADMIXTURE (2009)
- IQ-TREE (2015)
- IQ-TREE 2 (2020)
- Maximum Likelihood Phylogeny (2014)
- PhyML (2003)
- RAxML-NG (2019)
pipeline
6 个算法
quantification
6 个算法
alignment
5 个算法
- CRAM (2011)
- Cactus (2011)
- STAR (2013)
- STARsolo (2021)
- VG (Variation Graph) (2017)
clustering
5 个算法
- MMseqs2 (2017)
- Seurat (2015)
- Seurat Spatial (2021)
- cuteSV (2020)
- stLearn (2021)
gene-prediction
5 个算法
- AUGUSTUS (2005)
- GeneMark-ES (2005)
- Glimmer (1998)
- Prodigal (2010)
- RNAmmer (2007)
haplotype
5 个算法
- FreeBayes (2012)
- GATK HaplotypeCaller (2010)
- HapFLK (2013)
- Octopus (2021)
- Selscan (2014)
multiple-alignment
5 个算法
- Clustal Omega (2011)
- Kalign (2005)
- MAFFT (2002)
- MUSCLE (2004)
- POA (2002)
reference-based
5 个算法
- CRAM (2011)
- CellTypist (2022)
- RSEM (2011)
- RagTag (2022)
- Reference-Guided Assembly (2011)
selection
5 个算法
- BayeScan (2008)
- HapFLK (2013)
- PCAdapt (2016)
- Selscan (2014)
- Tajima's D (1989)
statistical
5 个算法
- DESeq2 (2014)
- DSS (2014)
- Maximum Likelihood Phylogeny (2014)
- SPARK (2019)
- edgeR (2010)
versatile
5 个算法
de-novo
4 个算法
- De Bruijn Graph Assembly (2001)
- MaSuRCA (2013)
- Overlap-Layout-Consensus (OLC) (2010)
- RFdiffusion (2023)
gwas
4 个算法
integration
4 个算法
- Harmony (2019)
- Seurat (2015)
- Seurat Spatial (2021)
- scArches (2022)
lossless
4 个算法
- GZIP for FASTQ (1992)
- SPRING (2019)
- fqzcomp (2014)
- seqwish (2020)
mcmc
4 个算法
- BEAST2 (2014)
- Bayesian Phylogenetic Inference (2001)
- MrBayes (2012)
- STRUCTURE (2000)
metagenome
4 个算法
multi-modal
4 个算法
- AlphaFold3 (2024)
- Chai-1 (2024)
- Seurat (2015)
- Seurat Spatial (2021)
preprocessing
4 个算法
- Alevin (2019)
- Cell Ranger (2017)
- STARsolo (2021)
- kallisto | bustools (2021)
probabilistic
4 个算法
- HMMER (2011)
- SpatialDE (2018)
- scVI (2018)
- scVI-tools (2023)
protein-design
4 个算法
- ProGen (2020)
- ProteinMPNN (2022)
- RFdiffusion (2023)
- Rosetta (2003)
snp
4 个算法
- DeepVariant (2018)
- FreeBayes (2012)
- GATK HaplotypeCaller (2010)
- MuTect2 (2013)
somatic
4 个算法
- DeepSomatic (2024)
- MuTect2 (2013)
- Strelka2 (2018)
- SvABA (2016)
variation-graph
4 个算法
- GCSA2 (2017)
- GraphAligner (2019)
- HiFiBD (2022)
- VG (Variation Graph) (2017)
ab-initio
3 个算法
batch-correction
3 个算法
- Harmony (2019)
- scVI (2018)
- scVI-tools (2023)
binning
3 个算法
classification
3 个算法
- Centrifuge (2016)
- Kaiju (2016)
- Kraken2 (2019)
comprehensive
3 个算法
- Giotto Suite (2021)
- InterProScan (2014)
- Seurat (2015)
database-search
3 个算法
- BLAST (1990)
- BLAST-based Annotation (1990)
- Exonerate (2005)
domain-detection
3 个算法
- HMMER (2011)
- InterProScan (2014)
- PfamScan (2011)
efficient
3 个算法
- Ankh (2023)
- CRAM (2011)
- Reference-Guided Assembly (2011)
eukaryotic
3 个算法
gene-finding
3 个算法
germline
3 个算法
- Clair3 (2022)
- GATK HaplotypeCaller (2010)
- Strelka2 (2018)
heuristic
3 个算法
hifi
3 个算法
high-ratio
3 个算法
- Genozip (2021)
- SPRING (2019)
- SPRING Compress (2020)
high-throughput
3 个算法
- Bowtie2 (2012)
- Burrows-Wheeler Transform Alignment (2009)
- parasail (2016)
hybrid
3 个算法
indexing
3 个算法
- BGZF and Tabix (2011)
- Burrows-Wheeler Transform Alignment (2009)
- GCSA2 (2017)
k-mer
3 个算法
- De Bruijn Graph Assembly (2001)
- GCSA2 (2017)
- Kraken2 (2019)
low-memory
3 个算法
- Centrifuge (2016)
- HISAT2 (2015)
- MetaPhlAn (2012)
marker-gene
3 个算法
- MetaPhlAn (2012)
- MetaPhlAn 4 (2023)
- mOTUs (2017)
methylation
3 个算法
model-selection
3 个算法
molecular-clock
3 个算法
- BEAST2 (2014)
- Bayesian Phylogenetic Inference (2001)
- RevBayes (2016)
nanopore
3 个算法
ont
3 个算法
open-source
3 个算法
orthology
3 个算法
- KofamKOALA (2020)
- OrthoFinder (2019)
- eggNOG-mapper (2017)
population-structure
3 个算法
- ADMIXTURE (2009)
- PCA for Population Structure (2006)
- STRUCTURE (2000)
short-read
3 个算法
- Bowtie2 (2012)
- Burrows-Wheeler Transform Alignment (2009)
- De Bruijn Graph Assembly (2001)
single-cell
3 个算法
single-sequence
3 个算法
species-level
3 个算法
splice-aware
3 个算法
standard
3 个算法
- GZIP for FASTQ (1992)
- PLINK (2007)
- QUAST (2013)
taxonomic
3 个算法
- Centrifuge (2016)
- Kaiju (2016)
- Kraken2 (2019)
tree-building
3 个算法
- FastTree (2010)
- Maximum Likelihood Phylogeny (2014)
- Neighbor-Joining (1987)
umi
3 个算法
- Alevin (2019)
- Cell Ranger (2017)
- STARsolo (2021)
adaptive
2 个算法
ancestry
2 个算法
- ADMIXTURE (2009)
- PCA for Population Structure (2006)
archival
2 个算法
assembly-based
2 个算法
biobank
2 个算法
bioconductor
2 个算法
- limma-voom (2014)
- tximport (2016)
bisulfite-seq
2 个算法
cancer
2 个算法
- DeepSomatic (2024)
- MuTect2 (2013)
clinical
2 个算法
database
2 个算法
diffusion
2 个算法
- AlphaFold3 (2024)
- Boltz-1 (2024)
dynamic-programming
2 个算法
- Needleman-Wunsch (1970)
- Smith-Waterman (1981)
evidence-based
2 个算法
expectation-maximization
2 个算法
fm-index
2 个算法
gene-family
2 个算法
- HUMAnN (2014)
- OrthoFinder (2019)
genotyping
2 个算法
go-annotation
2 个算法
- InterProScan (2014)
- eggNOG-mapper (2017)
graph-alignment
2 个算法
- GraphAligner (2019)
- Minigraph (2020)
graph-based
2 个算法
- De Bruijn Graph Assembly (2001)
- POA (2002)
histone
2 个算法
kegg
2 个算法
- KofamKOALA (2020)
- eggNOG-mapper (2017)
lightweight
2 个算法
- Ankh (2023)
- kallisto | bustools (2021)
linear-model
2 个算法
- Ballgown (2014)
- limma-voom (2014)
mags
2 个算法
minimizer
2 个算法
non-parametric
2 个算法
outlier-detection
2 个算法
pacbio
2 个算法
pathway-analysis
2 个算法
- HUMAnN (2014)
- KofamKOALA (2020)
pca
2 个算法
- PCA for Population Structure (2006)
- PCAdapt (2016)
peak-calling
2 个算法
prediction
2 个算法
pretrained
2 个算法
profiling
2 个算法
- MetaPhlAn 4 (2023)
- mOTUs (2017)
progressive
2 个算法
- Cactus (2011)
- Clustal Omega (2011)
protein-family
2 个算法
pseudoalignment
2 个算法
- Kallisto (2016)
- kallisto | bustools (2021)
random-access
2 个算法
- BGZF and Tabix (2011)
- Genozip (2021)
refinement
2 个算法
representation-learning
2 个算法
scaffolding
2 个算法
- RagTag (2022)
- Reference-Guided Assembly (2011)
segmentation
2 个算法
self-training
2 个算法
- GeneMark-ES (2005)
- Prodigal (2010)
specialized-compression
2 个算法
template-based
2 个算法
transcript-level
2 个算法
transcription-factor
2 个算法
transfer-learning
2 个算法
transformer
2 个算法
ultra-fast
2 个算法
ultrafast-bootstrap
2 个算法
vae
2 个算法
variant-calling
2 个算法
- PanVC (2023)
- VG (Variation Graph) (2017)
variant-effect
2 个算法
10x-genomics
1 个算法
- Cell Ranger (2017)
3Di
1 个算法
- Foldseek (2023)
abundance
1 个算法
- MetaPhlAn (2012)
abundance-estimation
1 个算法
- Bracken (2017)
accessible
1 个算法
- ColabFold (2022)
accurate
1 个算法
- RoseTTAFold (2021)
alignment-to-graph
1 个算法
- seqwish (2020)
amplicon
1 个算法
- QIIME 2 (2019)
annotation-pipeline
1 个算法
- MAKER (2008)
approximate-likelihood
1 个算法
- FastTree (2010)
assembly
1 个算法
- metaPOST (2021)
assembly-evaluation
1 个算法
- QUAST (2013)
assembly-polishing
1 个算法
- RagTag (2022)
association
1 个算法
- PLINK (2007)
atac-seq
1 个算法
- HMMRATAC (2019)
attention
1 个算法
- AlphaFold (2021)
automated
1 个算法
- BRAKER (2016)
bacterial
1 个算法
- Unicycler (2017)
bam
1 个算法
- CRAM (2011)
bert
1 个算法
- ProtBERT (2020)
beta-binomial
1 个算法
- DSS (2014)
biomolecular
1 个算法
- Boltz-1 (2024)
bit-parallel
1 个算法
- Edlib (2017)
block-compression
1 个算法
- BGZF and Tabix (2011)
bootstrap
1 个算法
- Sleuth (2017)
breakend
1 个算法
- GRIDSS (2017)
breakpoint
1 个算法
- Sniffles2 (2023)
breakthrough
1 个算法
- AlphaFold (2021)
bwt
1 个算法
cell-communication
1 个算法
- CellChat (2021)
cell-detection
1 个算法
- Cellpose (2020)
cell-interaction
1 个算法
- Squidpy (2021)
cell-nuclei
1 个算法
- StarDist (2018)
cell-type
1 个算法
- CellTypist (2022)
chip-seq
1 个算法
- MACS2 (2008)
chromatin
1 个算法
- DeepSEA (2015)
chromatin-state
1 个算法
- ChromHMM (2012)
chromosome-level
1 个算法
- Hifiasm (2021)
circular
1 个算法
- Unicycler (2017)
clade-specific
1 个算法
- MetaPhlAn 4 (2023)
cnn
1 个算法
- DeepVariant (2018)
coalescent
1 个算法
- ASTRAL (2018)
coding-potential
1 个算法
- GeneMark (1993)
colab
1 个算法
- ColabFold (2022)
comparative-genomics
1 个算法
- OrthoFinder (2019)
comparative-modeling
1 个算法
- MODELLER (1993)
comparison
1 个算法
- TM-align (2005)
compressed-index
1 个算法
- Centrifuge (2016)
compressed-suffix-array
1 个算法
- GCSA2 (2017)
conditional-generation
1 个算法
- ProGen (2020)
context-modeling
1 个算法
- MANGO (2018)
contig
1 个算法
- MetaBAT 2 (2019)
coverage
1 个算法
- MetaBAT 2 (2019)
cpg
1 个算法
- Bismark (2011)
de-bruijn
1 个算法
- SPAdes (2012)
differential-analysis
1 个算法
- methylKit (2012)
differentiation
1 个算法
- Monocle 3 (2019)
diffusion-model
1 个算法
- RFdiffusion (2023)
dimensionality-reduction
1 个算法
- PCA for Population Structure (2006)
distance-based
1 个算法
- Neighbor-Joining (1987)
divergence-time
1 个算法
diversity
1 个算法
- QIIME 2 (2019)
dmr
1 个算法
- DSS (2014)
domain
1 个算法
- InterPro (2014)
drug-discovery
1 个算法
- Chai-1 (2024)
edit-distance
1 个算法
- Edlib (2017)
embedding
1 个算法
- Harmony (2019)
empirical-bayes
1 个算法
- edgeR (2010)
encryption
1 个算法
- Genozip (2021)
energy-function
1 个算法
- Rosetta (2003)
enhanced
1 个算法
- MetaPhlAn 4 (2023)
epigenetic
1 个算法
- Bismark (2011)
error-correction
1 个算法
- Canu (2017)
exon-intron
1 个算法
- AUGUSTUS (2003)
fft
1 个算法
- MAFFT (2002)
fld
1 个算法
- HapFLK (2013)
flexible
1 个算法
- RevBayes (2016)
fpkm
1 个算法
- Ballgown (2014)
fragment-assembly
1 个算法
- I-TASSER (2008)
frugal
1 个算法
- alevin-fry (2022)
fst
1 个算法
- BayeScan (2008)
functional
1 个算法
- HUMAnN (2014)
functional-prediction
1 个算法
- DeepSEA (2015)
functional-profiling
1 个算法
- HUMAnN 3 (2018)
fuzzy-bruijn
1 个算法
- Wtdbg2 (2019)
gatk
1 个算法
- MuTect2 (2013)
gaussian-process
1 个算法
- SpatialDE (2018)
gene-families
1 个算法
- HUMAnN 3 (2018)
gene-regulatory
1 个算法
- SCENIC (2020)
gene-tree
1 个算法
- ASTRAL (2018)
general-purpose
1 个算法
- GZIP for FASTQ (1992)
generative
1 个算法
- ProGen (2020)
genome-alignment
1 个算法
- LASTZ (2004)
genome-annotation
1 个算法
- MAKER (2008)
genome-compression
1 个算法
- MANGO (2018)
genome-finishing
1 个算法
- RagTag (2022)
genomics
1 个算法
- BGZF and Tabix (2011)
germline-somatic
1 个算法
- Octopus (2021)
ghmm
1 个算法
- AUGUSTUS (2003)
glm
1 个算法
- SPARK (2019)
global-alignment
1 个算法
- Needleman-Wunsch (1970)
gpu-accelerated
1 个算法
- Scanpy (2018)
graph-analysis
1 个算法
- Squidpy (2021)
graph-assembly
1 个算法
- Manta (2016)
graph-construction
1 个算法
- seqwish (2020)
graph-neural-network
1 个算法
- ProteinMPNN (2022)
graph-operations
1 个算法
- odgi (2020)
grn
1 个算法
- SCENIC (2020)
guide-tree
1 个算法
- Clustal Omega (2011)
haplotype-aware
1 个算法
- Hifiasm (2021)
high-accuracy
1 个算法
- DeepVariant (2018)
high-similarity
1 个算法
- WFA2-lib (2023)
homology-modeling
1 个算法
- MODELLER (1993)
ihs
1 个算法
- Selscan (2014)
image-analysis
1 个算法
- Squidpy (2021)
image-integration
1 个算法
- stLearn (2021)
imaging
1 个算法
- Cellpose (2020)
imm
1 个算法
- Glimmer (1998)
import
1 个算法
- tximport (2016)
indel
1 个算法
- GATK HaplotypeCaller (2010)
integrated
1 个算法
- InterPro (2014)
interactive
1 个算法
- Giotto Suite (2021)
interpolated-markov-model
1 个算法
- GLIMMER (1998)
inverse-folding
1 个算法
- ProteinMPNN (2022)
iterative
1 个算法
- MUSCLE (2004)
kraken
1 个算法
- Bracken (2017)
ligand-receptor
1 个算法
- CellChat (2021)
lightweight-mapping
1 个算法
- Alevin (2019)
lmm
1 个算法
- BOLT-LMM (2015)
local-adaptation
1 个算法
- PCAdapt (2016)
local-alignment
1 个算法
- Smith-Waterman (1981)
logistic-regression
1 个算法
- CellTypist (2022)
membrane-protein
1 个算法
- TMHMM (2001)
memory-efficient
1 个算法
- alevin-fry (2022)
metabolic
1 个算法
- HUMAnN 3 (2018)
metropolis-coupled
1 个算法
- MrBayes (2012)
microbiome
1 个算法
- QIIME 2 (2019)
mixed-model
1 个算法
- SAIGE (2018)
mixture-model
1 个算法
- IQ-TREE 2 (2020)
model-finder
1 个算法
- IQ-TREE 2 (2020)
monte-carlo
1 个算法
- Rosetta (2003)
msa
1 个算法
- ColabFold (2022)
multi-database
1 个算法
- InterProScan (2014)
multi-format
1 个算法
- Genozip (2021)
multi-kmer
1 个算法
- SPAdes (2012)
multi-platform
1 个算法
- Giotto Suite (2021)
multi-sample
1 个算法
- Octopus (2021)
multi-species
1 个算法
- Cactus (2011)
myers
1 个算法
- Edlib (2017)
n50
1 个算法
- QUAST (2013)
negative-binomial
1 个算法
- DESeq2 (2014)
network
1 个算法
- CellChat (2021)
neutrality-test
1 个算法
- Tajima's D (1989)
noiseq
1 个算法
- NOISeq (2015)
offset-correction
1 个算法
- tximport (2016)
open-chromatin
1 个算法
- HMMRATAC (2019)
open-weight
1 个算法
- Chai-1 (2024)
overlap
1 个算法
paired-end
1 个算法
- Delly (2012)
pairwise
1 个算法
- Exonerate (2005)
parallel
1 个算法
- parasail (2016)
partial-order
1 个算法
- POA (2002)
partition
1 个算法
- IQ-TREE 2 (2020)
pathogenicity
1 个算法
- ESM-1v (2021)
pathway
1 个算法
- HUMAnN 3 (2018)
pattern-detection
1 个算法
- SpatialDE (2018)
pfam
1 个算法
- PfamScan (2011)
phylodynamics
1 个算法
- BEAST2 (2014)
polyploid
1 个算法
- FreeBayes (2012)
population-differentiation
1 个算法
- HapFLK (2013)
population-genetics
1 个算法
- Tajima's D (1989)
population-scale
1 个算法
- Sniffles2 (2023)
post-processing
1 个算法
- metaPOST (2021)
precision-weight
1 个算法
- limma-voom (2014)
probabilistic-programming
1 个算法
- RevBayes (2016)
profile-hmm
1 个算法
- PfamScan (2011)
protein-alignment
1 个算法
- DIAMOND (2015)
protein-level
1 个算法
- Kaiju (2016)
pseudotime
1 个算法
- Monocle 3 (2019)
python
1 个算法
- Scanpy (2018)
pytorch
1 个算法
- OpenFold (2022)
qc
1 个算法
- PLINK (2007)
quality
1 个算法
- metaPOST (2021)
quality-assessment
1 个算法
- QUAST (2013)
quality-score
1 个算法
- fqzcomp (2014)
rapid
1 个算法
- Prokka (2014)
rare-variant
1 个算法
- SAIGE (2018)
reference-assisted
1 个算法
- Orione (2015)
reference-free
1 个算法
- MANGO (2018)
reference-mapping
1 个算法
- scArches (2022)
regulatory-network
1 个算法
- SCENIC (2020)
remote-homology
1 个算法
- HMMER (2011)
reordering
1 个算法
- SPRING Compress (2020)
repeat-graph
1 个算法
- Flye (2019)
resequencing
1 个算法
- Reference-Guided Assembly (2011)
ribosomal
1 个算法
- RNAmmer (2007)
rmsd
1 个算法
- TM-align (2005)
rna-seq-hints
1 个算法
- AUGUSTUS (2003)
rrbs
1 个算法
- methylKit (2012)
rrna
1 个算法
- RNAmmer (2007)
run-length
1 个算法
- Shasta (2020)
sam
1 个算法
- Orione (2015)
scverse
1 个算法
- Scanpy (2018)
search
1 个算法
- MMseqs2 (2017)
secretion
1 个算法
- SignalP (2019)
seed-extend
1 个算法
- GraphAligner (2019)
selective-alignment
1 个算法
- Salmon (2017)
semi-hmm
1 个算法
- SNAP (2004)
semi-supervised
1 个算法
- scANVI (2021)
sensitive
1 个算法
- Kaiju (2016)
sequence-design
1 个算法
- ProteinMPNN (2022)
sequence-embedding
1 个算法
- ProtBERT (2020)
sequence-similarity
1 个算法
- BLAST-based Annotation (1990)
short-read-first
1 个算法
- Unicycler (2017)
signal-peptide
1 个算法
- SignalP (2019)
signaling
1 个算法
- CellChat (2021)
simd
1 个算法
- parasail (2016)
simpleaf
1 个算法
- alevin-fry (2022)
sorting
1 个算法
- odgi (2020)
spatially-variable-gene
1 个算法
- SPARK (2019)
species-tree
1 个算法
- ASTRAL (2018)
split-read
1 个算法
- Delly (2012)
standardized
1 个算法
- Bakta (2021)
star-convex
1 个算法
- StarDist (2018)
streaming
1 个算法
- fqzcomp (2014)
structural-alignment
1 个算法
- Foldseek (2023)
structure-alignment
1 个算法
- TM-align (2005)
structure-generation
1 个算法
- RFdiffusion (2023)
structure-refinement
1 个算法
- I-TASSER (2008)
structure-search
1 个算法
- Foldseek (2023)
summarization
1 个算法
- tximport (2016)
summary-method
1 个算法
- ASTRAL (2018)
super-read
1 个算法
- MaSuRCA (2013)
surgery
1 个算法
- scArches (2022)
sv-detection
1 个算法
- Delly (2012)
t2t
1 个算法
- Verkko (2023)
t5
1 个算法
- ProtTrans (2021)
t5-architecture
1 个算法
- Ankh (2023)
telomere-to-telomere
1 个算法
- Verkko (2023)
tetranucleotide
1 个算法
- MetaBAT 2 (2019)
threading
1 个算法
- I-TASSER (2008)
three-track
1 个算法
- RoseTTAFold (2021)
trainable
1 个算法
- OpenFold (2022)
trajectory
1 个算法
- stLearn (2021)
trajectory-inference
1 个算法
- Monocle 3 (2019)
transcript-assembly
1 个算法
- StringTie (2015)
transmembrane
1 个算法
- TMHMM (2001)
two-stage
1 个算法
- REGENIE (2021)
unbalanced
1 个算法
- SAIGE (2018)
universal
1 个算法
- mOTUs (2017)
variational-autoencoder
1 个算法
- scVI-tools (2023)
vectorized
1 个算法
- parasail (2016)
visualization
1 个算法
- odgi (2020)
wavefront
1 个算法
- WFA2-lib (2023)
whole-genome
1 个算法
- LASTZ (2004)
wu-manber
1 个算法
- Kalign (2005)
xp-ehh
1 个算法
- Selscan (2014)
zero-shot
1 个算法
- ESM-1v (2021)